SoftwareDuel

Wave Payroll vs Pilot

A head-to-head comparison to help you pick the right tool

Wave Payroll

Wave Payroll is a simple payroll solution built into the Wave accounting ecosystem. It is designed for very small businesses that already use Wave for accounting and want an integrated payroll solution. Wave Payroll handles direct deposit, tax payments, and W-2s, making it a natural choice for businesses already in the Wave ecosystem.

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Pilot

Pilot is a managed accounting service that combines software with a dedicated team of bookkeepers to handle your books each month. Built for startups and small businesses that want accounting done for them.

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Pros

  • Seamlessly integrates with Wave accounting — no manual data transfer needed
  • Very affordable pricing for micro-businesses
  • Simple interface with minimal setup required
  • Free Wave accounting included with subscription

Cons

  • Limited features compared to dedicated payroll platforms
  • Tax filing is only automatic in select states — manual filing required in others
  • No mobile payroll app
  • Not suitable for businesses with complex payroll needs

Pros

  • Fully managed bookkeeping service
  • Dedicated finance experts included
  • Built specifically for startups
  • Integrates with common startup tools
  • Good for venture-backed companies

Cons

  • More expensive than DIY software
  • Less control over day-to-day bookkeeping
  • Not suited for businesses wanting to manage their own books
  • US-focused

Our Take

Choose Wave Payroll if micro-businesses already using wave accounting that want simple integrated payroll. Choose Pilot if startups and small businesses wanting fully managed bookkeeping with a dedicated team rather than diy software.

Best For

Micro-businesses already using Wave accounting that want simple integrated payroll

Best For

Startups and small businesses wanting fully managed bookkeeping with a dedicated team rather than DIY software